Antimicrobial Activity of Actinomycetes Isolated from Different soil samples of Vellore Region

 

Nirmala Devi P, Sudesh Warma S, Srinivasan M, Merlyn Keziah. S, Subathra Devi C*

School of Biosciences and Technology, VIT University, Vellore, Tamil Nadu, India.

*Corresponding Author E-mail: subaresearch@rediffmail.com

 

ABSTRACT:

The main objective of the present study was isolation, purification, and characterization of actinomycetes from soil samples. Soil samples were taken from different niche habitats of Vellore district, Tamil Nadu, India. Potential isolate was screened morphologically and biochemically characterised, further were subjected to extraction for the creation of the antibacterial compound. The strains JS26, JS27, and JS28 were discovered profoundly potential, Isolate JS27 displayed the most noteworthy activity against Bacillus cereus (22 mm) and Enterococcus faecalis (25 mm). Ethyl acetate extract showed 89% restraint towards free radicals DPPH (1,1-Diphenyl-2-picrylhydrazyl). The gas chromatography-mass spectroscopy (GC-MS) demonstrated the few unstable mixes. Consequently the outcome showed that the ethyl acetate concentrate of confine groups have tendency to prevent cancer and could be utilized as a part of the advancement of new bioactive metabolites  for pharmaceutical purposes.

 

KEYWORDS: Actinomycetes, antimicrobial activity, pathogens,ant-oxidants,bioactivity

 

 


INTRODUCTION:

Soil microorganisms give a brilliant asset to the seclusion and distinguishing proof of restoratively imperative items. Among them, actinomycetales are a vital gathering.1 The request actinomycetales is made out of roughly 80 genera, about all from earthbound soils, where they live essentially as saprophytes, water and colonizing plants demonstrating stamped synthetic and morphological differences, yet from a particular developmental line2 Actinomycetes are gram-positive microorganisms with high guanine+cytosine substance of more than 55%3 in their DNA, which have been perceived as wellsprings of a few auxiliary metabolites, anti-toxins, and bioactive exacerbates that influence microbial development.4 Actinomycetes have filamentous nature, expanding example, and conidia development, which are like those of growths. Therefore, they are otherwise called beam organisms5 Actinomycetes create expanding mycelium viz.; substrate and aerial mycelium.

 

Streptomyces are the predominant of all actinomycetes6 Countless have been separated and screened from soil in the previous a very long while, representing 70%-80% of pertinent optional metabolites accessible monetarily.7 Actinomycetes are potential wellspring of numerous bioactive mixes8,9,10,11 which have different clinical impacts and imperative applications in human pharmaceutical.12 It has been assessed that around 33% of the a huge number of normally happening anti-microbials has been acquired from actinomycetes.13 Oxidative push is a vital patron to the patho-physiology of an assortment of obsessive conditions, including cardiovascular brokenness, atherosclerosis, aggravation, carcinogenesis, sedate harmfulness, and reperfusion damage and neurodegenerative illnesses.14 Cell reinforcement assumes a critical part in the avoidance of pathologies, in which responsive oxygen species (ROS) are ensnared.15 They are sure normally happening cell reinforcements that can offer insurance to liver from hepatotoxins. The resistance issue requests to find new antibacterial specialists successful against safe pathogenic microscopic organisms and parasites. In this way, we have to screen increasingly actinomycetes from various environments for antimicrobial action in the trust of getting some new actinomycetes strains that deliver anti-microbials, which have not been found yet and are dynamic against medication safe pathogens. Nowadays research is currently coordinated towards normal cancer prevention agents from plants and microorganisms and serves as protected therapeutics. Accordingly, this study was proposed to develop the cancer prevention agent and antibacterial properties of actinomycetes source.

 

MATERIALS AND METHODS:

Soil Sampling and Pre treatment:

Soil tests were gathered from various specialty natural surroundings of Vellore locale (topographical directions: scope 25.67°N and longitude 76.7°E), Tamilnadu, India. Soils were gathered from various areas of Vellore, for example, field, close plant surface, poultry homestead, and well. Tests were gathered by embeddings a disinfected polyvinyl corer into the dregs. The cover was cleaned with liquor before inspecting at every area. Every accumulation was produced using 6-12 inches profundity of the surface of the ground. These examples were put in sterile poly packs, fixed firmly, and transported quickly to the research facility.16

 

Isolation of actinomycetes:

One gram of dried soil was suspended in 99 mL sterile water and serially weakened in sterile water up to 10−7. An aliquot of 0.1 mL of every weakening was taken and spread uniformly over the surface of actinomycete medium17,18 supplemented with cyclohexamide (50 μg/mL) and nystatin (50 μg/mL) Followed by incubation  7 days at 27°C.20,21

 

Morphological characterization :

Actinomycete isolates were inoculated on seven different ISP media (ISP1-ISP7) and incubated for 5 days at 30°C. The colonies were observed under a high-power magnifying lens and colony morphology was noted with respect to color, aerial and substrate mycelium, branching, and the nature of the colony.22

 

Biochemical characterization:

After preliminary studies, the isolates which were found to be positive were selected for biochemical studies. Biochemical tests generally used are gelatin hydrolysis, starch hydrolysis, urea hydrolysis, acid production from different sugars, hydrogen sulfide production test, motility test, triple sugar iron (TSI) agar test, citrate utilization test, indole test, methyl red test, Voges-Proskauer test, and catalase test, oxidase test.23

 

Test organism and screening for potent actinomycetes:

Test organisms were obtained from IMTECH, Chandigarh. The selected human pathogenic microorganisms used in antimicrobial study were Bacillus cereus MTCC 430, Enterococcus faecalis MTCC 29. Cross-streak strategy24 was used to screen the potential actinomycete isolates using Mueller Hinton Agar (MHA).

 

Extraction of bioactive compound:

Potent bioactive compound producing isolate JS27 was taken in 50 mL of ISP1 medium incubated for 7 days at 150 rpm.26 The supernatant was extracted at 10,000 rpm for 10 min to evacuate cells. Equal volume of ethyl acetate  was added and left over for 24 h in a rotatory shaker. The totally dried deposits were re-broken down in dimethyl sulfoxide (DMSO) and lyophilized, to be utilized for further studies27, 28.

 

Determination of the antibacterial Activity:

Antibacterial activity was checked using  by agar well diffusion assay. Cell Concentration of all test microorganisms was balanced at 0.5 McFarland turbidity guidelines and vaccinated on MHA plates by utilizing cleaned cotton swabs. Wells were exhausted by sanitizing 1000 μL small scale tip, and 100 μL of each JS27 rough concentrate was filled over the wells. Plates were brooded at 37°C for 24 h29.

 

DPPH free radical scavenging activity:

Essentially different concentrations (0.1, 0.5, 1.0 &5.0 mg/mL) of the JS27 ethyl acetate  derivation were taken in a different tube and the ascorbic corrosive was utilized as reference compound (like 0.2, 0.4, 0.8, 1.0 and 5.0 mg/mL). Utilizing methanol to newly arranged the 0.002% DPPH (1,1 Diphenyl-2-Picrylhydrazyl) was added to every tube containing diverse centralizations of concentrates (2mL) for 37˚C at 20mins and measured at 515nm.30

 

Gas chromatography and mass spectroscopy (GC-MS) Analysis:

To identify the various bioactive compounds GC-MS technique was utilised. In this technique, interpretation was carried out though  NIST08 and WILEY8. The relative percentage of each component was calculated by comparing its average peak area to the total areas.31,33

 

RESULTS:

Actinomycetes have been seriously concentrated on in a few underexplored situations, specialty, and extraordinary territories in different parts of the world (counting India) in the most recent couple of years. However, there is no report with respect to confinement of actinomycetes from vellore locale. An endeavour has been made to seclude the actinomycetes from this unexplored district keeping in mind the end goal to discover novel species. Absolutely 15 actinomycetes strains were disconnected from soil tests of various territories in view of the gram recoloring and state morphology. All the isolates were observed to be sure in grams staining and had distinctive morphological structures. The biochemical properties of actinomycetes isolates were recorded [Table 1, 2, 3; Fig 1].


 

Table 1: Morphological Properties of strain Streptomyces sp VITJS27

Morphological properties

Sporophore morphology

Spore surface

Colour of aerial mycelium

Colour of substrate mycelium

Gram staining

Acid fast staining

Motility

Spiral

Smooth

Ash

Ash

+

Non-acid fast

-

 


Table 2: Cultural properties of Streptomyces sp VITJS27

Medium

Growth

ISP medium 1

Good

ISP medium 2

Good

ISP medium 3

Good

ISP medium 4

Very Good

ISP medium 5

Good

ISP medium 6

Better

ISP medium 7

Good

Bennett agar

Good

Nutrient agar

Better

Czapex Dox agar

Good

Kenknight's agar

Very good

Actinomycete isolation agar

Very good

 

Table 3 Biochemical and physiological properties of Streptomyces sp VITJS27

Microscopy

 

Corn steep liquor

+

Grams stain

+

Sodium acetate

-

Colony pigmentation

-

Sodium citrate

-

Melanin pigmentation

-

Urea

-

Motility

-

Effect of Temperature*

Soluble pigment

-

15oC

-

Carbon source

28 oC

+

D-glucose

+

37 oC

+

D-galactose

-

45 oC

-

Mannose

-

Effect of pH*

Maltose

+

5

-

Lactose

+

6

-

Trehalose

-

7

+

Melibose

-

8

-

Amino acid utilization

9

-

Cysteine

-

NaCl concentration

Arginine

-

1%

+

Therionine

-

2%

-

Alanine

+

3%

-

Aspartic acid

+

5%

-

Glycine

-

10%

-

Histidine

-

Hydrolysis

Lysine

-

Starch hydrolysis

+

Phenyl alanine

+

Nitrate reduction

-

Tryptophan

+

Gelatin liquefactions

-

Methionine

+

Hemolysis on blood agar

-

Isoleucine

-

Esculin hydrolysis

-

Valine

-

H2S

-

Ornithine

-

Antibiotic resistance

Asparagine

-

Streptomycin

S

Nitrogen Source

Tetracyclin

R

Peptone

+

Bacitracin

R

Yeast extract

+

Kanamycin

S

Casein

+

Ampicillin

S

Ammonium sulphate

-

Gentamicin

R

Ammonium nitrate

+

Rifampacin

R

Ammonium citrate

-

Vancomycin

R

Beef extract

+

Fluconazole

R

 

Fig 1 Pure culture of Streptomyces sp VITJS27 on starch casein agar

 

The potent isolate was streaked  with  cross-streak strategy Isolate is then screened for their inhibitory action against the human pathogenic microscopic organisms. The screening strategies were utilized to screen the actinomycetes for antibacterial action. The subjective approach was utilized to decide the scope of the isolates that are delicate to a potential anti-microbial. The quantitative approach gave the data about the yield of  potential isolates namely JS27 that was propagated on ISP1 broth. All the test estimations were completed in triplicates and were communicated as a normal of three examinations. Disconnects JS26, JS27, and JS28 were exceptionally dynamic, while JS26 demonstrated less movement against the pathogenic microorganisms. JS27 strain exhibited antibacterial activity against Bacillus cereus (22 mm) and Enterococcus faecalis (25 mm) [Fig 2, 3]. The comparable antimicrobial action had been likewise reported against chosen multidrug safe microorganisms. 28, 29 The JS27  extract showed antioxidant activity  with 89% percent at 1mg/mL [Fig 4]. Such reactivity has been generally used to test the capacity of a few mixes to go about as free radical foragers and to test the cancer prevention agent action. 32

 

 

Fig 2 Cross steak assay of Streptomyces sp VITJS27


              

                                                               (a)                                                                                                          (b)

Fig 3 Antibacterial activity of Streptomyces sp VITJS27 crude extract: (a) Bacillus cereus (22 mm) (b) Enterococcus faecalis (25 mm)


 

 

Fig 4

 

GC-MS investigation of rough concentrate of Streptomyces Sp. obviously showed the nearness of natural metabolite Decanedioic acid,Bis (2-ethylhexyl) ester with the retention time at 24.9 min [Fig 5]

 

 

Fig 5

 

DISCUSSION:

Actinomycetes have been intensively studied in several underexplored environments, niche, and extreme habitats in various parts of the world (including India) in the last few years.34 Characteristic items from soil actinomycetes are accounted for different bioactivity. These present research concentrate on different bioactive capability of marine Streptomyces mixes against bacterial pathogens and oxidants. The most recent seventy years as biotechnologically significant prokaryotes in charge of the generation of about portion of the found bioactive auxiliary metabolites, outstandingly anti-microbials, antitumor specialists, immunosuppressive operators and proteins. Past studies have indicated organic properties of actinomycetes. Previous studies on actinomycetes among six secluded settlements have demonstrated intense to be specific Streptomyces gancidicus VITSD1. The strain VITSD1 was discovered 100 % like Streptomyces gancidicus. The concentrate tried for antibiogram at 5mg/mL against pathogens was discovered most extreme antibacterial movement against Escherichia coli (30±0.92mm), Pseudomonas aeruginosa (28±0.93mm), Salmonella typhi (18±0.98mm) and Staphylococcus aureus (20±1.02mm).35 Antibacterial activity of actinomycetes isolated from different soil samples of Sheopur -a city of central India has been reported previously.35 Marine actinomycetes have been assessed as a standout amongst the most critical assets for the confinement of new mixes. There are appealing natural elements for the advancement of potential medications with particular cell targets. We found that Vellore of Tamil Nadu, India is a virtuous region of diverse actinomycetes and has been amply adequate due to its huge microbial diversity. 

 

CONCLUSION:

Marine actinomycetes, having bioactive property was isolated from soil samples,Vellore, India. These actinomycetes were characterized and identified as Streptomyces species. The active extract has proven to have various bioactivities which include anti-bacterial and anti-oxidant. These Streptomyces sp. strain are able to produce secondary metabolites responsible for the several bioactivities. These activities were checked for compound identification and analysis of GC-MS secondary metabolites. These active compound identified are previously has been stated for several bioactivities and also used as promoted drugs for bioactivities

 

CONFLICT OF INTEREST:

The authors declare that there is no conflict of interest in performing this study.

 

ACKNOWLEDGMENT:

We wish to thank VIT University for kind help and constant support

 

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Received on 29.06.2017                              Modified on 18.07.2017

Accepted on 22.08.2017                             © RJPT All right reserved

Research J. Pharm. and Tech 2018; 11(7): 3123- 3127.

DOI: 10.5958/0974-360X.2018.00573.5